Wikidata:Property proposal/hPSCreg cell line ID

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hPSCreg cell line ID[edit]

Originally proposed at Wikidata:Property proposal/Natural science

Descriptionidentifier for a cell line in the Human Pluripotent Stem Cell Registry (hPSCreg)
RepresentsHuman Pluripotent Stem Cell Registry (Q106457711)
Data typeExternal identifier
Domaincell line (Q21014462)
Allowed values^[A-Z]+(?:[A-Za-z0-9-_]{0,30})
Example 1201B7 (Q27554318)KUIFMSi004-C
Example 2ZZUi005-A (Q53996684)ZZUi005-A
Example 318b (Q54582501)HVRDi006-A
Example 4HPSI1116i-wakr_3 (Q54891700)WTSIi659-A
Planned useadd identifier to existing items about cell lines
Number of IDs in sourcecurrently about 3000 fully registered cell lines, plus about 2000 other entries
Expected completenessalways incomplete (Q21873886)
Formatter URLhttps://hpscreg.eu/cell-line/$1
Robot and gadget jobsThe existing workflow for managing Cellosaurus ID (P3289) could be adapted to include coverage of this new hPSCreg property.
See alsoCell Line Ontology ID (P2158), Cellosaurus ID (P3289), parent cell line (P3432), autologous cell line (P3578), established from medical condition (P5166), has marker (P8872), derived from organism type (P9072)
Applicable "stated in"-valueHuman Pluripotent Stem Cell Registry (Q106457711)
Distinct-values constraintyes

Motivation[edit]

This cell line database maps to several databases that already have Wikidata properties, especially Cellosaurus ID (P3289) and Cell Line Ontology ID (P2158), through which most of the cell lines indexed in hPSCreg already have Wikidata items. Note that hPSCreg entries are based on names for cell lines, not identifiers. As the names change, the location of the information in hPSCreg is updated, with the original name redirecting to the current one (example: ISMMSe002-B now redirects to WAe001-A-2). In Wikidata, this could be reflected by tagging the ISMMSe002-B statement as deprecated and the WAe001-A-2 one as preferred. conflict of interest (Q211067): I recently joined the team at Fraunhofer Institute for Biomedical Engineering (Q1167435) which runs Human Pluripotent Stem Cell Registry (Q106457711). Daniel Mietchen (talk) 00:34, 11 April 2021 (UTC)[reply]

Discussion[edit]

Tobias1984
Doc James
Bluerasberry
Gambo7
Daniel Mietchen
Andrew Su
Andrux
Pavel Dušek
Mvolz
User:Jtuom
Chris Mungall
ChristianKl
Gstupp
Sintakso
علاء
Adert
CFCF
Jtuom
Drchriswilliams
Okkn
CAPTAIN RAJU
LeadSongDog
Ozzie10aaaa
Marsupium
Netha Hussain
Abhijeet Safai
Seppi333
Shani Evenstein
Csisc
Morgankevinj
TiagoLubiana
ZI Jony
Antoine2711
JustScienceJS
Scossin
Josegustavomartins
Zeromonk
The Anome
Kasyap
JMagalhães

Notified participants of WikiProject Medicine. --Daniel Mietchen (talk) 00:37, 11 April 2021 (UTC)[reply]

@Daniel Mietchen, TiagoLubiana, Amb sib: ✓ Done Now hPSCreg cell line ID (P9554). --Lymantria (talk) 05:55, 12 May 2021 (UTC)[reply]